Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_03371Outer envelope protein 61. (539 aa)    
Predicted Functional Partners:
ACMD2_02368
Heat shock protein 83.
    
   0.680
ACMD2_00879
Tetraspanin-8.
      
 0.665
ACMD2_10736
SET and MYND domain-containing protein 4.
    
 
 0.662
ACMD2_09433
Ankyrin-3.
    
 
 0.655
ACMD2_12736
Small glutamine-rich tetratricopeptide repeat-containing protein beta.
    
 
 0.651
ACMD2_14896
Outer envelope protein 64, mitochondrial.
      
 0.643
ACMD2_11476
Protein FATTY ACID EXPORT 5.
   
  
 0.620
ACMD2_08951
Protein TIC 22, chloroplastic.
    
 
 0.599
ACMD2_18535
Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY.
      
 0.523
ACMD2_22954
Uncharacterized protein.
      
 0.520
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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