STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_07691Putative LRR receptor-like serine/threonine-protein kinase. (760 aa)    
Predicted Functional Partners:
ACMD2_05543
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
     
 0.594
ACMD2_23043
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
     
 0.591
ACMD2_08679
PHD finger-like domain-containing protein 5B.
    
  0.436
ACMD2_11396
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.431
ACMD2_11439
Protein STRUBBELIG-RECEPTOR FAMILY 2.
  
 
  0.429
ACMD2_04818
Cyclic nucleotide-gated ion channel 1.
    
 0.428
ACMD2_03043
Protein-tyrosine-phosphatase PTP1.
    
 0.426
ACMD2_02844
Small nuclear ribonucleoprotein-associated protein B.
    
 0.423
ACMD2_00676
LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
 
0.420
ACMD2_17378
Small nuclear ribonucleoprotein SmD3b.
    
 0.405
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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