STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_03788Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
ACMD2_00410
60S ribosomal protein L21-1.
   
   0.629
ACMD2_01498
60S ribosomal protein L21-2.
   
   0.629
ACMD2_12332
Cytochrome P450 98A3.
  
 
   0.467
ACMD2_14748
Topless-related protein 1.
  
 
   0.457
ACMD2_14106
Uncharacterized protein.
   
 
 0.456
ACMD2_07644
50S ribosomal protein L2, chloroplastic.
   
 
 0.456
ACMD2_06699
Uncharacterized protein.
  
     0.451
ACMD2_11904
Zinc-finger homeodomain protein 4.
  
     0.450
ACMD2_24210
Cellulose synthase-like protein D1; Belongs to the glycosyltransferase 2 family.
  
 
  0.449
ACMD2_11561
Cellulose synthase-like protein D1.
  
 
  0.446
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.