STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_2395460S acidic ribosomal protein P3. (91 aa)    
Predicted Functional Partners:
ACMD2_00733
60S ribosomal protein L5.
   
 0.995
ACMD2_15022
60S ribosomal protein L9.
   
 0.994
ACMD2_05338
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.994
ACMD2_07476
60S ribosomal protein L32-1.
   
 0.994
ACMD2_06439
60S ribosomal protein L28-2.
   
 0.993
ACMD2_02470
Ubiquitin-40S ribosomal protein S27a-3.
   
 0.992
ACMD2_13802
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.991
ACMD2_02721
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.987
ACMD2_00664
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.987
ACMD2_04060
60S ribosomal protein L37a.
   
 
 0.986
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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