STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_23414Organic cation/carnitine transporter 1. (526 aa)    
Predicted Functional Partners:
ACMD2_26600
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.765
ACMD2_14294
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.765
ACMD2_04141
Nitrate reductase (NADH).
    
 0.765
ACMD2_11825
Integrator complex subunit 9.
    
 0.703
ACMD2_22694
Cleavage and polyadenylation specificity factor subunit 3-II.
    
 0.689
ACMD2_06095
Integrator complex subunit 3.
    
 0.685
ACMD2_00006
Putative oxidoreductase YgbJ.
    
 0.538
ACMD2_00338
Histone-lysine N-methyltransferase SUVR5.
    
 0.509
ACMD2_10703
SOSS complex subunit B.
    
  0.475
ACMD2_10707
SOSS complex subunit B.
    
  0.475
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.