Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_07454Casein kinase I isoform delta-like; Belongs to the protein kinase superfamily. (469 aa)    
Predicted Functional Partners:
ACMD2_09537
Protein LTV.
    
 0.846
ACMD2_11415
Bystin.
    
 0.837
ACMD2_11824
Pre-rRNA-processing protein TSR.
    
 0.835
ACMD2_02973
RNA-binding protein NOB1; Belongs to the NOB1 family.
    
 0.817
ACMD2_04987
Amine oxidase.
    
 
 0.692
ACMD2_23636
Uncharacterized protein.
   
 0.684
ACMD2_18787
Serine/threonine-protein kinase rio2.
   
 0.684
ACMD2_21676
Serine/threonine-protein kinase rio2.
   
 0.684
ACMD2_21674
Serine/threonine-protein kinase rio2.
   
 0.684
ACMD2_08520
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.678
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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