STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_07268CCHC-type domain-containing protein. (400 aa)    
Predicted Functional Partners:
ACMD2_10394
Guanosine nucleotide diphosphate dissociation inhibitor 2.
   
 0.813
ACMD2_22941
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.813
ACMD2_01291
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.813
ACMD2_00141
Exocyst complex component SEC6.
  
 
 0.813
ACMD2_00290
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.813
ACMD2_10128
Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.
    
 0.807
ACMD2_01012
Exocyst complex component SEC8.
    
 0.766
ACMD2_07947
Exocyst complex component 5.
    
 0.752
ACMD2_05854
Vacuolar fusion protein CCZ.
    
 0.746
ACMD2_08747
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.746
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.