STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_26931Autophagy-related protein. (86 aa)    
Predicted Functional Partners:
ACMD2_07936
Uncharacterized protein.
   
 0.999
ACMD2_21729
Uncharacterized protein.
   
 0.999
ACMD2_01534
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.972
ACMD2_05075
Cysteine protease.
  
 0.921
ACMD2_10056
Cysteine protease.
  
 0.920
ACMD2_22908
Cysteine protease.
   
 0.901
ACMD2_17717
E3 ubiquitin-protein ligase PRT1.
   
 0.854
ACMD2_25063
Serine/threonine-protein kinase ULK3.
   
 0.840
ACMD2_26065
Uncharacterized protein.
   
 0.840
ACMD2_13611
Autophagy-related protein.
  
 
 
0.796
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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