STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_06781Putative thiamine biosynthetic bifunctional enzyme, chloroplastic. (514 aa)    
Predicted Functional Partners:
ACMD2_07524
Phosphomethylpyrimidine synthase, chloroplastic.
  
 
 0.992
ACMD2_16166
Hydroxyethylthiazole kinase.
 
 
 0.961
ACMD2_16163
Hydroxyethylthiazole kinase.
 
 
 0.945
ACMD2_11030
Bifunctional TENA2 protein.
     
 0.932
ACMD2_10029
Putative ribosome biogenesis GTPase RsgA.
    
  0.896
ACMD2_16873
Putative pyridoxal 5'-phosphate synthase subunit PDX2.
    
 0.885
ACMD2_05643
Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic.
     
 0.881
ACMD2_04063
Nudix hydrolase 20, chloroplastic.
     
 0.872
ACMD2_18447
Pyridoxal kinase.
   
 
 0.870
ACMD2_05397
Thiamine thiazole synthase 2, chloroplastic.
  
  
 0.864
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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