STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_00115Sphinganine C4-monooxygenase 2; Belongs to the sterol desaturase family. (255 aa)    
Predicted Functional Partners:
ACMD2_12706
3-dehydrosphinganine reductase TSC10A.
    
 0.910
ACMD2_07696
Sphingosine kinase 2.
   
 0.908
ACMD2_10962
Lipid phosphate phosphatase delta.
    
 0.899
ACMD2_05251
Sphingosine kinase 1.
   
 0.896
ACMD2_06469
Neutral ceramidase.
     
 0.877
ACMD2_11537
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
   
 
 0.877
ACMD2_12954
Alkaline ceramidase 3.
     
 0.874
ACMD2_02770
Alkaline ceramidase 3.
     
 0.874
ACMD2_07815
Sphinganine C4-monooxygenase 2; Belongs to the sterol desaturase family.
  
  
 
0.856
ACMD2_26821
ASC1-like protein 1.
   
 0.777
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.