Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_06094Calcium-dependent protein kinase SK5. (501 aa)    
Predicted Functional Partners:
ACMD2_13745
Respiratory burst oxidase.
   
 0.908
ACMD2_12639
Respiratory burst oxidase.
   
 0.901
ACMD2_25046
Respiratory burst oxidase.
   
 0.901
ACMD2_10379
Phytosulfokine receptor 2.
    
  0.895
ACMD2_25226
Phytosulfokine receptor 2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.895
ACMD2_20498
Phytosulfokine receptor 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.895
ACMD2_11013
Phytosulfokine receptor 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.895
ACMD2_15302
Respiratory burst oxidase.
   
 0.892
ACMD2_23452
Glutamine synthetase.
    
  0.889
ACMD2_20127
Glutamine synthetase leaf isozyme, chloroplastic.
    
  0.883
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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