STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_04923Transcription factor RF2b. (402 aa)    
Predicted Functional Partners:
ACMD2_00020
Chromatin structure-remodeling complex protein SYD.
   
 0.712
ACMD2_25063
Serine/threonine-protein kinase ULK3.
    
 0.676
ACMD2_26065
Uncharacterized protein.
    
 0.676
ACMD2_14896
Outer envelope protein 64, mitochondrial.
    
 0.578
ACMD2_20651
Translocon at the outer membrane of chloroplasts 64.
    
 0.578
ACMD2_05210
Protein RBL.
    
 0.540
ACMD2_06822
Protein TRAUCO.
    
 0.539
ACMD2_20181
Lysine-specific demethylase SE14.
    
 0.516
ACMD2_22001
Protein transport protein SEC B; Belongs to the WD repeat SEC13 family.
    
 0.512
ACMD2_00338
Histone-lysine N-methyltransferase SUVR5.
   
 0.505
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.