Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACMD2_00241Serine/threonine-protein kinase HT1; Belongs to the protein kinase superfamily. (399 aa)    
Predicted Functional Partners:
ACMD2_07936
Uncharacterized protein.
    
  0.673
ACMD2_21729
Uncharacterized protein.
    
  0.673
ACMD2_14288
SH3 domain-containing protein.
    
 0.590
ACMD2_25233
Wee1-like protein kinase; Belongs to the protein kinase superfamily.
  
 
 0.554
ACMD2_11849
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 5.
      
 0.545
ACMD2_13682
Mitogen-activated protein kinase kinase kinase A; Belongs to the protein kinase superfamily.
  
 
  0.508
ACMD2_01961
Delta-1-pyrroline-5-carboxylate synthase.
    
 0.482
ACMD2_06145
Delta-1-pyrroline-5-carboxylate synthase.
    
 0.482
ACMD2_06168
Serine/threonine-protein kinase dst1.
  
 
 
0.466
ACMD2_07950
Uncharacterized protein.
    
 0.456
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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