Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACMD2_12319Shaggy-related protein kinase iota; Belongs to the protein kinase superfamily. (398 aa)    
Predicted Functional Partners:
ACMD2_17348
Serine/threonine-protein phosphatase.
    
 0.950
ACMD2_08113
Protein BZR 1.
     
 0.888
ACMD2_19174
Protein BZR 1.
     
 0.888
ACMD2_17762
Serine/threonine-protein phosphatase BSL.
    
 0.887
ACMD2_22100
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.866
ACMD2_08991
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.866
ACMD2_07936
Uncharacterized protein.
    
 0.822
ACMD2_21729
Uncharacterized protein.
    
 0.822
ACMD2_25462
Myosin heavy chain kinase A.
    
 0.806
ACMD2_19561
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
    
 
 0.757
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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