STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_16057(Fructose-bisphosphate aldolase)-lysine N-methyltransferase, chloroplastic. (446 aa)    
Predicted Functional Partners:
ACMD2_02973
RNA-binding protein NOB1; Belongs to the NOB1 family.
   
    0.829
ACMD2_11415
Bystin.
   
    0.548
ACMD2_21415
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
    0.542
ACMD2_16514
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
    0.531
ACMD2_14149
KRR1 small subunit processome component.
   
    0.531
ACMD2_12832
Uncharacterized protein.
  
    0.479
ACMD2_20180
WD repeat-containing protein 3.
   
    0.478
ACMD2_22353
Uncharacterized protein.
  
    0.476
ACMD2_17788
Uncharacterized protein.
   
  
 0.424
ACMD2_17521
Ribosome production factor 1.
   
    0.416
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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