Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACMD2_02973 | ACMD2_11415 | A0A199W4H0 | A0A199ULP1 | RNA-binding protein NOB1; Belongs to the NOB1 family. | Bystin. | 0.999 |
ACMD2_02973 | ACMD2_12832 | A0A199W4H0 | A0A199W778 | RNA-binding protein NOB1; Belongs to the NOB1 family. | Uncharacterized protein. | 0.874 |
ACMD2_02973 | ACMD2_14149 | A0A199W4H0 | A0A199W7I0 | RNA-binding protein NOB1; Belongs to the NOB1 family. | KRR1 small subunit processome component. | 0.925 |
ACMD2_02973 | ACMD2_16057 | A0A199W4H0 | A0A199W8H2 | RNA-binding protein NOB1; Belongs to the NOB1 family. | (Fructose-bisphosphate aldolase)-lysine N-methyltransferase, chloroplastic. | 0.829 |
ACMD2_02973 | ACMD2_16514 | A0A199W4H0 | A0A199VP52 | RNA-binding protein NOB1; Belongs to the NOB1 family. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.925 |
ACMD2_02973 | ACMD2_17521 | A0A199W4H0 | A0A199UUA9 | RNA-binding protein NOB1; Belongs to the NOB1 family. | Ribosome production factor 1. | 0.929 |
ACMD2_02973 | ACMD2_17788 | A0A199W4H0 | A0A199VMC8 | RNA-binding protein NOB1; Belongs to the NOB1 family. | Uncharacterized protein. | 0.776 |
ACMD2_02973 | ACMD2_20180 | A0A199W4H0 | A0A199W813 | RNA-binding protein NOB1; Belongs to the NOB1 family. | WD repeat-containing protein 3. | 0.915 |
ACMD2_02973 | ACMD2_21415 | A0A199W4H0 | A0A199UVL5 | RNA-binding protein NOB1; Belongs to the NOB1 family. | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | 0.934 |
ACMD2_02973 | ACMD2_22353 | A0A199W4H0 | A0A199V5I6 | RNA-binding protein NOB1; Belongs to the NOB1 family. | Uncharacterized protein. | 0.874 |
ACMD2_11415 | ACMD2_02973 | A0A199ULP1 | A0A199W4H0 | Bystin. | RNA-binding protein NOB1; Belongs to the NOB1 family. | 0.999 |
ACMD2_11415 | ACMD2_12832 | A0A199ULP1 | A0A199W778 | Bystin. | Uncharacterized protein. | 0.888 |
ACMD2_11415 | ACMD2_14149 | A0A199ULP1 | A0A199W7I0 | Bystin. | KRR1 small subunit processome component. | 0.993 |
ACMD2_11415 | ACMD2_16057 | A0A199ULP1 | A0A199W8H2 | Bystin. | (Fructose-bisphosphate aldolase)-lysine N-methyltransferase, chloroplastic. | 0.548 |
ACMD2_11415 | ACMD2_16514 | A0A199ULP1 | A0A199VP52 | Bystin. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.993 |
ACMD2_11415 | ACMD2_17521 | A0A199ULP1 | A0A199UUA9 | Bystin. | Ribosome production factor 1. | 0.968 |
ACMD2_11415 | ACMD2_17788 | A0A199ULP1 | A0A199VMC8 | Bystin. | Uncharacterized protein. | 0.601 |
ACMD2_11415 | ACMD2_20180 | A0A199ULP1 | A0A199W813 | Bystin. | WD repeat-containing protein 3. | 0.998 |
ACMD2_11415 | ACMD2_21415 | A0A199ULP1 | A0A199UVL5 | Bystin. | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | 0.917 |
ACMD2_11415 | ACMD2_22353 | A0A199ULP1 | A0A199V5I6 | Bystin. | Uncharacterized protein. | 0.888 |
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