STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_16782Mini zinc finger protein 1. (100 aa)    
Predicted Functional Partners:
ACMD2_14486
Uncharacterized protein.
  
     0.526
ACMD2_18389
Uncharacterized protein.
  
     0.525
ACMD2_12313
Uncharacterized protein.
  
     0.519
ACMD2_17610
AT-hook motif nuclear-localized protein 1.
  
     0.513
ACMD2_21923
Uncharacterized protein.
  
     0.501
ACMD2_14748
Topless-related protein 1.
  
     0.499
ACMD2_04173
Homeobox-leucine zipper protein HOX27.
  
 
   0.499
ACMD2_10442
Uncharacterized protein.
  
     0.494
ACMD2_05239
Membrane-anchored ubiquitin-fold protein 1.
  
     0.493
ACMD2_01769
Serine/threonine-protein kinase STY46.
  
     0.491
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.