STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570405_00091Unannotated protein. (127 aa)    
Predicted Functional Partners:
GCA_001570405_00092
Unannotated protein.
 
     0.908
GCA_001570405_00097
Unannotated protein.
 
  
 0.776
GCA_001570405_00090
Unannotated protein.
       0.773
GCA_001570405_00094
Unannotated protein.
 
     0.735
GCA_001570405_00095
Unannotated protein.
 
     0.663
GCA_001570405_00093
Unannotated protein.
 
    0.647
GCA_001570405_06953
Unannotated protein.
  
  
 0.610
GCA_001570405_02749
Unannotated protein.
  
     0.571
GCA_001570405_00096
Unannotated protein.
 
     0.555
GCA_001570405_03952
Unannotated protein.
  
     0.533
Your Current Organism:
Microtetraspora niveoalba
NCBI taxonomy Id: 46175
Other names: ATCC 27301, DSM 43174, IFO 15239, JCM 3149, M. niveoalba, NBRC 15239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.