STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570405_00646Unannotated protein. (219 aa)    
Predicted Functional Partners:
GCA_001570405_02438
Unannotated protein.
  
 
 0.982
GCA_001570405_04474
Unannotated protein.
    
 0.714
GCA_001570405_04475
Unannotated protein.
    
 0.714
GCA_001570405_04616
Unannotated protein.
    
 0.714
GCA_001570405_02425
Unannotated protein.
  
   0.711
GCA_001570405_02423
Unannotated protein.
  
   0.707
GCA_001570405_02422
Unannotated protein.
  
   0.685
GCA_001570405_02419
Unannotated protein.
  
   0.677
GCA_001570405_02420
Unannotated protein.
  
   0.677
GCA_001570405_00645
Unannotated protein.
       0.578
Your Current Organism:
Microtetraspora niveoalba
NCBI taxonomy Id: 46175
Other names: ATCC 27301, DSM 43174, IFO 15239, JCM 3149, M. niveoalba, NBRC 15239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.