STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570405_01001Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_001570405_04078
Unannotated protein.
  
  
 
0.860
GCA_001570405_03775
Unannotated protein.
  
  
 
0.856
GCA_001570405_04723
Unannotated protein.
  
 
 
0.838
GCA_001570405_02566
Unannotated protein.
  
 
 
0.834
GCA_001570405_05057
Unannotated protein.
  
  
 
0.826
GCA_001570405_06950
Unannotated protein.
  
  
 
0.826
GCA_001570405_01378
Unannotated protein.
  
  
 
0.824
GCA_001570405_02983
Unannotated protein.
  
  
 
0.821
GCA_001570405_00843
Unannotated protein.
  
  
 
0.697
GCA_001570405_00403
Unannotated protein.
  
  
 
0.695
Your Current Organism:
Microtetraspora niveoalba
NCBI taxonomy Id: 46175
Other names: ATCC 27301, DSM 43174, IFO 15239, JCM 3149, M. niveoalba, NBRC 15239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.