STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570405_03953Unannotated protein. (287 aa)    
Predicted Functional Partners:
GCA_001570405_05342
Unannotated protein.
 
 0.996
GCA_001570405_03742
Unannotated protein.
 
  
 0.976
GCA_001570405_05343
Unannotated protein.
 
  
 0.884
GCA_001570405_00471
Unannotated protein.
    
 0.804
GCA_001570405_01489
Unannotated protein.
    
 0.792
GCA_001570405_00457
Unannotated protein.
    
 0.788
GCA_001570405_04498
Unannotated protein.
     
 0.788
GCA_001570405_05754
Unannotated protein.
     
 0.749
GCA_001570405_05420
Unannotated protein.
     
 0.748
GCA_001570405_05023
Unannotated protein.
    
  0.705
Your Current Organism:
Microtetraspora niveoalba
NCBI taxonomy Id: 46175
Other names: ATCC 27301, DSM 43174, IFO 15239, JCM 3149, M. niveoalba, NBRC 15239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.