STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570405_06496Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_001570405_03300
Unannotated protein.
   
   0.903
GCA_001570405_03907
Unannotated protein.
   
   0.903
GCA_001570405_06624
Unannotated protein.
   
   0.903
GCA_001570405_06495
Unannotated protein.
       0.807
GCA_001570405_06497
Unannotated protein.
       0.787
GCA_001570405_06491
Unannotated protein.
 
     0.777
GCA_001570405_06498
Unannotated protein.
       0.774
GCA_001570405_06500
Unannotated protein.
       0.772
GCA_001570405_06492
Unannotated protein.
 
     0.758
GCA_001570405_06499
Unannotated protein.
       0.757
Your Current Organism:
Microtetraspora niveoalba
NCBI taxonomy Id: 46175
Other names: ATCC 27301, DSM 43174, IFO 15239, JCM 3149, M. niveoalba, NBRC 15239
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.