STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK26501.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
SEK26542.1
Cytochrome bd terminal oxidase subunit II.
       0.723
SEN37038.1
Diaminopropionate ammonia-lyase.
  
  
  0.719
SEK26578.1
Cytochrome d ubiquinol oxidase subunit I.
       0.717
SEM28854.1
Hypothetical protein.
  
     0.532
SEK26623.1
Two component transcriptional regulator, LuxR family.
  
    0.515
SEK26660.1
Signal transduction histidine kinase.
       0.512
SEL47497.1
Acetyltransferase (GNAT) family protein.
  
     0.511
SEL26260.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
    
  0.500
SEM68731.1
Hypothetical protein.
  
     0.489
SEN36117.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.469
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.