STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK36049.1DNA-binding transcriptional activator of the SARP family. (956 aa)    
Predicted Functional Partners:
SEK36015.1
DNA-binding transcriptional activator of the SARP family.
 
   
0.654
SEM33445.1
Predicted ATPase.
 
    0.649
SEK84513.1
S-adenosyl methyltransferase.
  
     0.526
SEL15482.1
Protein of unknown function.
  
     0.521
SEM68699.1
S-adenosyl methyltransferase.
  
     0.518
SEN15707.1
S-adenosyl methyltransferase.
  
     0.517
SEK87702.1
O-Methyltransferase involved in polyketide biosynthesis.
  
     0.516
SEK35929.1
Castor and Pollux, part of voltage-gated ion channel.
       0.515
SEK35972.1
Hypothetical protein.
       0.515
SEL05862.1
S-adenosyl methyltransferase.
  
     0.492
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.