STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK63569.1Phospholipase_D-nuclease N-terminal. (145 aa)    
Predicted Functional Partners:
SEM27108.1
Hypothetical protein.
 
     0.765
SEN39107.1
Hypothetical protein.
  
     0.491
SEM60339.1
Alkyl sulfatase BDS1, metallo-beta-lactamase superfamily.
  
     0.482
SEN69504.1
Conserved hypothetical protein.
  
     0.477
SEL48773.1
DUF4097 and DUF4098 domain-containing protein YvlB.
  
     0.465
SEL02063.1
Uncharacterized membrane protein.
 
     0.450
SEK63551.1
Hypothetical protein.
       0.445
SEK54879.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
     0.437
SEK63597.1
AAA ATPase domain-containing protein.
 
     0.432
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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