STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK67472.1Transcriptional regulator, XRE family with cupin sensor. (182 aa)    
Predicted Functional Partners:
SEK67430.1
L-amino acid N-acyltransferase YncA.
 
     0.786
SEN14467.1
Transcriptional regulator, XRE family with cupin sensor.
  
     0.771
SEK71819.1
Transcriptional regulator, XRE family with cupin sensor.
  
    0.759
SEK88457.1
Transcriptional regulator, XRE family with cupin sensor.
  
     0.759
SEN39617.1
Transcriptional regulator, XRE family with cupin sensor.
  
     0.733
SEN36736.1
Transcriptional regulator, XRE family with cupin sensor.
  
     0.669
SEK67513.1
Hypothetical protein.
       0.642
SEK67552.1
Transcriptional regulator, TetR family.
       0.642
SEK68631.1
Transcriptional regulator, XRE family with cupin sensor.
  
     0.545
SEN23842.1
TIGR03083 family protein.
  
   0.467
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.