STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK70271.1CubicO group peptidase, beta-lactamase class C family. (461 aa)    
Predicted Functional Partners:
SEM63056.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
     0.788
SEN27976.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
 
     0.775
SEK70000.1
DNA-binding transcriptional regulator, PucR family.
  
     0.628
SEK70309.1
Dihydrofolate reductase.
       0.516
SEK70354.1
Activator of Hsp90 ATPase homolog 1-like protein.
       0.516
SEK70399.1
DNA-binding transcriptional regulator, ArsR family.
       0.516
SEK71736.1
Peptide/nickel transport system substrate-binding protein.
 
     0.511
SEM63217.1
Peptide/nickel transport system substrate-binding protein.
 
     0.503
SEK70090.1
Erythromycin esterase.
 
    0.499
SEN27789.1
Peptide/nickel transport system substrate-binding protein.
 
     0.498
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.