SEK75908.1 protein (Nonomuraea pusilla) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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[Homology]

Score

SEK75908.1

Myo-inositol-1-phosphate synthase. (383 aa)

Predicted Functional Partners:

SEK75798.1

0.958

SEK75828.1

0.958

SEK75858.1

0.958

SEK75699.1

0.955

SEK75767.1

0.955

SEK75731.1

0.950

SEL02951.1

0.933

SEL29062.1

0.859

SEM28730.1

0.859

SEL94957.1

0.842

Your Current Organism:

Nonomuraea pusilla

NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEK75699.1	SEK75731.1	SAMN05660976_01170	SAMN05660976_01171	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	Sugar phosphate isomerase/epimerase.	0.954
SEK75699.1	SEK75767.1	SAMN05660976_01170	SAMN05660976_01172	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	Hypothetical protein.	0.960
SEK75699.1	SEK75798.1	SAMN05660976_01170	SAMN05660976_01173	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	Hypothetical protein.	0.959
SEK75699.1	SEK75828.1	SAMN05660976_01170	SAMN05660976_01174	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	Sugar phosphate isomerase/epimerase.	0.957
SEK75699.1	SEK75858.1	SAMN05660976_01170	SAMN05660976_01175	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	4-hydroxybenzoate polyprenyltransferase.	0.960
SEK75699.1	SEK75908.1	SAMN05660976_01170	SAMN05660976_01176	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	Myo-inositol-1-phosphate synthase.	0.955
SEK75731.1	SEK75699.1	SAMN05660976_01171	SAMN05660976_01170	Sugar phosphate isomerase/epimerase.	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	0.954
SEK75731.1	SEK75767.1	SAMN05660976_01171	SAMN05660976_01172	Sugar phosphate isomerase/epimerase.	Hypothetical protein.	0.955
SEK75731.1	SEK75798.1	SAMN05660976_01171	SAMN05660976_01173	Sugar phosphate isomerase/epimerase.	Hypothetical protein.	0.954
SEK75731.1	SEK75828.1	SAMN05660976_01171	SAMN05660976_01174	Sugar phosphate isomerase/epimerase.	Sugar phosphate isomerase/epimerase.	0.952
SEK75731.1	SEK75858.1	SAMN05660976_01171	SAMN05660976_01175	Sugar phosphate isomerase/epimerase.	4-hydroxybenzoate polyprenyltransferase.	0.954
SEK75731.1	SEK75908.1	SAMN05660976_01171	SAMN05660976_01176	Sugar phosphate isomerase/epimerase.	Myo-inositol-1-phosphate synthase.	0.950
SEK75767.1	SEK75699.1	SAMN05660976_01172	SAMN05660976_01170	Hypothetical protein.	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	0.960
SEK75767.1	SEK75731.1	SAMN05660976_01172	SAMN05660976_01171	Hypothetical protein.	Sugar phosphate isomerase/epimerase.	0.955
SEK75767.1	SEK75798.1	SAMN05660976_01172	SAMN05660976_01173	Hypothetical protein.	Hypothetical protein.	0.959
SEK75767.1	SEK75828.1	SAMN05660976_01172	SAMN05660976_01174	Hypothetical protein.	Sugar phosphate isomerase/epimerase.	0.958
SEK75767.1	SEK75858.1	SAMN05660976_01172	SAMN05660976_01175	Hypothetical protein.	4-hydroxybenzoate polyprenyltransferase.	0.964
SEK75767.1	SEK75908.1	SAMN05660976_01172	SAMN05660976_01176	Hypothetical protein.	Myo-inositol-1-phosphate synthase.	0.955
SEK75798.1	SEK75699.1	SAMN05660976_01173	SAMN05660976_01170	Hypothetical protein.	Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.	0.959
SEK75798.1	SEK75731.1	SAMN05660976_01173	SAMN05660976_01171	Hypothetical protein.	Sugar phosphate isomerase/epimerase.	0.954

page 1 of 3

Network Stats

number of nodes:

7

number of edges:

7

average node degree:

2

avg. local clustering coefficient:

0.867

expected number of edges:

6

PPI enrichment p-value:

0.399

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000271

Polysaccharide biosynthetic process

7 of 51

1.59

2.41

1.64e-07

GO:0045226

Extracellular polysaccharide biosynthetic process

2 of 7

1.91

0.76

0.0364

GO:1901576

Organic substance biosynthetic process

8 of 559

0.61

0.41

0.0139

GO:0044238

Primary metabolic process

11 of 1019

0.48

0.4

0.00097

GO:0071704

Organic substance metabolic process

11 of 1255

0.39

0.31

0.0068

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2111

Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase

10 of 44

1.81

4.58

7.34e-15

CL:2112

O-Antigen nucleotide sugar biosynthesis, and Citrate lyase beta subunit-like

7 of 27

1.87

3.76

2.27e-10

CL:2113

Mixed, incl. Citrate lyase beta subunit-like, and UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase

5 of 14

2.0

3.12

1.44e-07

CL:2115

Mixed, incl. UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase, and UDP-N-acetylglucosamine 2-epimerase

4 of 6

2.28

3.02

1.07e-06

CL:2168

Carbohydrate transport, and Peptidyl-tyrosine modification

3 of 6

2.15

1.96

0.00015

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00541

O-Antigen nucleotide sugar biosynthesis

5 of 31

1.66

2.09

7.65e-06

map00525

Acarbose and validamycin biosynthesis

2 of 6

1.97

0.92

0.0178

map00523

Polyketide sugar unit biosynthesis

2 of 8

1.85

0.9

0.0178

map00521

Streptomycin biosynthesis

2 of 11

1.71

0.88

0.0178

map00520

Amino sugar and nucleotide sugar metabolism

3 of 43

1.3

0.76

0.0178

(more ...)

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