STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK76211.1Glucose/arabinose dehydrogenase, beta-propeller fold. (1919 aa)    
Predicted Functional Partners:
SEL63674.1
Hypothetical protein.
    
  0.858
SEM97650.1
Hypothetical protein.
    
  0.856
SEK75798.1
Hypothetical protein.
 
   
 0.849
SEM46907.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
  0.838
SEM89317.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
  0.838
SEK75767.1
Hypothetical protein.
 
     0.833
SEL33585.1
Hypothetical protein.
    
  0.830
SEK75731.1
Sugar phosphate isomerase/epimerase.
 
   
 0.827
SEL20089.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
    
 0.827
SEK75858.1
4-hydroxybenzoate polyprenyltransferase.
 
     0.824
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.