STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK89854.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
SEK89811.1
Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.923
SEK89931.1
Two-component system, LytT family, sensor kinase.
 
     0.829
SEK89889.1
Two component transcriptional regulator, LytTR family.
 
     0.802
SEL22025.1
Two component transcriptional regulator, LytTR family.
 
     0.798
SEK89776.1
Uncharacterized membrane protein, DUF485 family.
 
     0.582
SEK89732.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.519
SEM97922.1
Methyltransferase domain-containing protein.
  
     0.518
SEL99368.1
Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family.
  
     0.447
SEM52553.1
FAD/FMN-containing dehydrogenase.
  
     0.426
SEL99580.1
Glucose-6-phosphate isomerase.
  
     0.413
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.