STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL14997.1Spherulation-specific family 4. (210 aa)    
Predicted Functional Partners:
SEM24356.1
WD40 repeat.
    
 0.685
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.662
SEL31722.1
Hypothetical protein.
 
     0.591
SEL14960.1
Chaperonin GroES.
   
   0.564
SEK76211.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
  0.511
SEM78800.1
Phosphoglycolate phosphatase, HAD superfamily.
  
    0.496
SEN51610.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
    0.487
SEM68132.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
   
   0.467
SEM91807.1
Right handed beta helix region.
   
   0.467
SEM91950.1
Right handed beta helix region.
   
   0.467
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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