STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL16311.1Putative copper resistance protein D. (661 aa)    
Predicted Functional Partners:
SEL16280.1
Hypothetical protein.
 
  
 0.950
SEM38723.1
Uncharacterized protein YcnI.
  
  
 0.865
SEK55863.1
Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
  
 0.859
SEL20089.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
 
  
 0.839
SEL04304.1
Hypothetical protein.
 
  
 0.822
SEL20117.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
 
    0.767
SEL19922.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.753
SEK55727.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
 
    0.735
SEL53811.1
Cytochrome c biogenesis protein.
  
    0.719
SEL20148.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
 
  
 0.716
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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