STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL23235.1Amino acid/polyamine/organocation transporter, APC superfamily. (474 aa)    
Predicted Functional Partners:
SEL23204.1
Nucleotide-binding universal stress protein, UspA family.
 
    0.833
SEL23261.1
Carbamate kinase; Belongs to the carbamate kinase family.
  
  
 0.804
SEL23314.1
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3).
 
    
0.760
arcA
Arginine deiminase.
  
  
 0.726
SEN64747.1
Hypothetical protein.
    
 0.623
SEK26405.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
  0.568
SEK62185.1
Alpha-glucosidase.
    
  0.568
SEL84441.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
    
  0.568
SEM21027.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
  0.568
SEM37504.1
Alpha-glucosidase.
    
  0.568
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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