STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL30078.1Protein of unknown function. (64 aa)    
Predicted Functional Partners:
SEL30110.1
Glycosyltransferase, GT2 family.
 
     0.823
SEM39259.1
Glycosyl transferase family 2.
 
     0.739
SEL96725.1
Glycosyl transferases group 1.
 
     0.725
SEL96840.1
ADP-heptose:LPS heptosyltransferase.
 
     0.691
SEL96865.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.688
SEM39196.1
ADP-heptose:LPS heptosyltransferase.
  
     0.657
SEL96993.1
ADP-heptose:LPS heptosyltransferase.
 
     0.627
SEN59998.1
ADP-heptose:LPS heptosyltransferase.
  
     0.622
SEL96926.1
rfaE bifunctional protein, domain I/rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
  
     0.551
SEL30141.1
Transcriptional regulator, TetR family.
       0.545
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.