STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL31876.1PucR C-terminal helix-turn-helix domain-containing protein. (362 aa)    
Predicted Functional Partners:
SEL47850.1
Hypothetical protein.
    
  0.685
SEL31831.1
L-proline dehydrogenase.
       0.559
SEL31790.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
       0.546
SEN83707.1
Purine catabolism regulatory protein-like family protein.
  
     0.545
SEM29069.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.462
SEM21002.1
Hypothetical protein.
  
     0.460
SEN84068.1
Transcriptional regulator, CdaR family.
  
     0.442
SEM21048.1
Putative ABC transport system permease protein.
  
     0.434
SEK28429.1
CHAP domain-containing protein.
  
     0.433
SEM61412.1
Regulatory protein, luxR family.
  
  
  0.411
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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