STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL49909.1Zn-dependent protease with chaperone function. (314 aa)    
Predicted Functional Partners:
SEL49938.1
Predicted transcriptional regulator.
 
 
  0.960
SEN40583.1
Predicted transcriptional regulator.
 
 
  0.827
SEL49874.1
Hypothetical protein.
 
     0.723
SEM54253.1
TIGR03086 family protein.
  
     0.586
SEK89066.1
TIGR03086 family protein.
  
     0.543
SEL49841.1
Hypothetical protein.
       0.451
SEN14333.1
TIGR03086 family protein.
  
     0.426
SEL83707.1
Hypothetical protein.
  
     0.414
SEM18921.1
Protein of unknown function.
  
     0.412
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.