STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL50278.1Predicted phosphohydrolase, MPP superfamily. (287 aa)    
Predicted Functional Partners:
SEK99610.1
Protein of unknown function.
  
     0.672
SEL50314.1
Hypothetical protein.
       0.669
SEL18462.1
Protein of unknown function.
  
     0.659
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.636
SEN40137.1
Hypothetical protein; Belongs to the GcvT family.
  
     0.631
SEM50444.1
Protein of unknown function.
  
     0.622
SEK35151.1
C-terminal four TMM region of protein-O-mannosyltransferase.
  
     0.611
SEL02797.1
Protein of unknown function.
  
     0.608
SEL53722.1
Broad specificity phosphatase PhoE.
  
     0.593
rbpA
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.573
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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