STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL51003.1Tight adherence protein B. (238 aa)    
Predicted Functional Partners:
SEL50943.1
Pilus assembly protein CpaF.
  
  
 0.917
SEL50907.1
Helicase/secretion neighborhood CpaE-like protein.
 
     0.860
SEK33015.1
Flp pilus assembly protein CpaB.
 
  
 0.816
SEL51035.1
Type II secretion system (T2SS), protein F.
     0.803
SEL50975.1
Hypothetical protein.
       0.773
SEN06525.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.707
SEN08002.1
Hypothetical protein.
  
     0.704
SEM04848.1
Pilus assembly protein, ATPase of CpaF family.
  
  
 0.648
SEL80472.1
Hypothetical protein.
  
     0.644
SEM05862.1
Hypothetical protein.
  
    0.629
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.