STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL64947.1Glyoxalase-like domain-containing protein. (133 aa)    
Predicted Functional Partners:
SEN48650.1
Transcriptional regulator, TetR family.
 
     0.768
SEM72817.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.631
SEL81124.1
Helix-turn-helix domain-containing protein.
  
    0.542
SEL73761.1
Glyoxylase, beta-lactamase superfamily II.
  
 
  0.496
SEL73888.1
Glyoxylase, beta-lactamase superfamily II.
  
 
  0.496
SEL63329.1
Transcriptional regulator, ArsR family.
  
 
  0.483
SEL64907.1
FMN adenylyltransferase; Belongs to the ribF family.
       0.483
rpsO
Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.470
SEK71107.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
     0.434
SEK59984.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.424
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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