STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL69009.1Acetyltransferase (GNAT) domain-containing protein. (251 aa)    
Predicted Functional Partners:
SEL27900.1
Glutamate synthase (NADH) large subunit.
   
 
 0.679
SEL69034.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
    0.638
SEM37309.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.
  
 
 0.630
SEK40112.1
Tannase and feruloyl esterase.
  
     0.573
SEN47379.1
Hypothetical protein.
  
     0.556
SEL26260.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
    
  0.544
SEK29982.1
Hypothetical protein.
  
 
   0.542
SEL56492.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.523
SEK92124.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.496
SEL04823.1
Drug resistance transporter, EmrB/QacA subfamily.
  
     0.462
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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