STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL85704.1Adenylate cyclase. (338 aa)    
Predicted Functional Partners:
SEL47850.1
Hypothetical protein.
   
 0.965
SEL63607.1
Cyclic nucleotide-binding domain-containing protein.
  
 0.955
SEM73063.1
GTPase SAR1 family protein.
 
 
 0.895
SEL50589.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
 
 0.871
SEN43059.1
PAS domain S-box-containing protein.
  
 0.860
SEN30879.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
 0.834
SEN64747.1
Hypothetical protein.
   
 0.833
SEN76082.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
 0.819
SEM24356.1
WD40 repeat.
   
 0.813
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.774
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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