STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL98105.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. (95 aa)    
Predicted Functional Partners:
SEL98089.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 0.999
SEL98133.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 0.999
SEL98033.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.998
SEL98060.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.998
SEL02664.1
acyl-CoA thioesterase.
 
 
 0.976
SEL98166.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
  
 0.972
SEK45043.1
tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like.
  
 0.954
SEL02709.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.929
SEL92934.1
Ferredoxin-NADP reductase.
 
 
 0.906
SEL42759.1
AMP-binding enzyme.
 
 
 0.895
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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