STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM00431.1Glyoxylase, beta-lactamase superfamily II. (219 aa)    
Predicted Functional Partners:
SEM00406.1
Maleylpyruvate isomerase.
       0.806
SEN29332.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.770
SEK45525.1
Adenylyltransferase and sulfurtransferase.
 
  0.628
SEL50562.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.595
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.535
SEM95930.1
Amino acid adenylation domain-containing protein.
   
 0.518
SEN48978.1
Phosphopantetheine attachment site.
   
 0.518
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
 
   
 0.481
SEL47641.1
Protein of unknown function.
  
     0.467
SEN48877.1
Glycine C-acetyltransferase.
  
 
 0.451
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.