STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM14940.1Purine catabolism regulatory protein. (490 aa)    
Predicted Functional Partners:
SEM14889.1
Purine-cytosine permease; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.854
SEM14917.1
Agmatinase; Belongs to the arginase family.
 
     0.663
SEM21048.1
Putative ABC transport system permease protein.
  
     0.663
SEL45767.1
Uracil-DNA glycosylase; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
  
     0.628
SEN26348.1
Mannosyltransferase.
  
     0.591
SEM14865.1
Kynurenine formamidase.
       0.561
SEL97617.1
Hypothetical protein.
  
     0.549
SEK64963.1
Transcriptional regulator, TetR family.
  
    0.515
SEL45801.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
  
     0.503
SEK85617.1
ADP-ribosylglycohydrolase.
  
     0.491
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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