STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM21074.1Putative ABC transport system ATP-binding protein. (242 aa)    
Predicted Functional Partners:
SEM62816.1
Putative ABC transport system permease protein.
  
 0.990
SEM35332.1
Putative ABC transport system permease protein.
  0.984
SEM21048.1
Putative ABC transport system permease protein.
 
  0.949
SEK28647.1
Putative ABC transport system permease protein.
  0.908
SEN73360.1
Putative ABC transport system permease protein.
  0.881
SEM67564.1
Putative ABC transport system permease protein.
  0.869
SEM21093.1
Transcriptional regulator, PadR family.
       0.778
SEM07235.1
Polar amino acid transport system permease protein.
 
   
  0.729
SEM93010.1
Putative ABC transport system permease protein.
  
  0.725
SEM38651.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.706
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.