Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEK23387.1 | SEK30373.1 | SAMN05660976_00039 | SAMN05660976_00213 | Hypothetical protein. | SNF2 family N-terminal domain-containing protein. | 0.732 |
| SEK23387.1 | SEL47850.1 | SAMN05660976_00039 | SAMN05660976_02568 | Hypothetical protein. | Hypothetical protein. | 0.415 |
| SEK23387.1 | SEL95177.1 | SAMN05660976_00039 | SAMN05660976_03775 | Hypothetical protein. | VacB and RNase II family 3'-5' exoribonucleases. | 0.501 |
| SEK23387.1 | SEM28225.1 | SAMN05660976_00039 | SAMN05660976_04734 | Hypothetical protein. | Hypothetical protein. | 0.730 |
| SEK23387.1 | nnrD | SAMN05660976_00039 | SAMN05660976_04205 | Hypothetical protein. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...] | 0.989 |
| SEK23387.1 | rph | SAMN05660976_00039 | SAMN05660976_04439 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.855 |
| SEK30373.1 | SEK23387.1 | SAMN05660976_00213 | SAMN05660976_00039 | SNF2 family N-terminal domain-containing protein. | Hypothetical protein. | 0.732 |
| SEK30373.1 | SEK45002.1 | SAMN05660976_00213 | SAMN05660976_00577 | SNF2 family N-terminal domain-containing protein. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.732 |
| SEK30373.1 | SEL47850.1 | SAMN05660976_00213 | SAMN05660976_02568 | SNF2 family N-terminal domain-containing protein. | Hypothetical protein. | 0.624 |
| SEK30373.1 | SEL95177.1 | SAMN05660976_00213 | SAMN05660976_03775 | SNF2 family N-terminal domain-containing protein. | VacB and RNase II family 3'-5' exoribonucleases. | 0.711 |
| SEK30373.1 | SEL98718.1 | SAMN05660976_00213 | SAMN05660976_03898 | SNF2 family N-terminal domain-containing protein. | Superfamily II DNA and RNA helicase. | 0.732 |
| SEK30373.1 | SEM28225.1 | SAMN05660976_00213 | SAMN05660976_04734 | SNF2 family N-terminal domain-containing protein. | Hypothetical protein. | 0.820 |
| SEK30373.1 | nnrD | SAMN05660976_00213 | SAMN05660976_04205 | SNF2 family N-terminal domain-containing protein. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...] | 0.994 |
| SEK30373.1 | rph | SAMN05660976_00213 | SAMN05660976_04439 | SNF2 family N-terminal domain-containing protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.818 |
| SEK45002.1 | SEK30373.1 | SAMN05660976_00577 | SAMN05660976_00213 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | SNF2 family N-terminal domain-containing protein. | 0.732 |
| SEK45002.1 | SEL47850.1 | SAMN05660976_00577 | SAMN05660976_02568 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Hypothetical protein. | 0.415 |
| SEK45002.1 | SEL95177.1 | SAMN05660976_00577 | SAMN05660976_03775 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | VacB and RNase II family 3'-5' exoribonucleases. | 0.501 |
| SEK45002.1 | SEM28225.1 | SAMN05660976_00577 | SAMN05660976_04734 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Hypothetical protein. | 0.730 |
| SEK45002.1 | nnrD | SAMN05660976_00577 | SAMN05660976_04205 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...] | 0.989 |
| SEK45002.1 | rph | SAMN05660976_00577 | SAMN05660976_04439 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.855 |
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