STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM37042.1Cellobiose-binding protein. (448 aa)    
Predicted Functional Partners:
SEM37023.1
Cellobiose transport system permease protein.
 
  0.997
SEM36989.1
Cellobiose transport system permease protein.
 
  0.973
SEN15023.1
Cellobiose ABC transporter membrane protein.
 
  0.952
SEN14982.1
Cellobiose ABC transporter membrane protein.
  
  0.950
SEK94257.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
  
 0.877
SEM15131.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 0.877
SEM38000.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.877
SEN15057.1
Cellobiose-binding protein.
  
  
 
0.854
SEM45389.1
Multiple sugar transport system permease protein.
   
  0.771
SEM28795.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
  
 0.659
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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