STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM37400.1Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (453 aa)    
Predicted Functional Partners:
SEM37377.1
Sensor histidine kinase regulating citrate/malate metabolism.
 
  
 0.891
SEM37339.1
Response regulator of citrate/malate metabolism.
 
   
 0.858
SEL27900.1
Glutamate synthase (NADH) large subunit.
     
 0.639
SEM73063.1
GTPase SAR1 family protein.
    
  0.637
SEL96563.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.620
SEM89230.1
Two-component system, CitB family, sensor kinase.
 
  
 0.586
SEL55229.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
    
 0.497
SEM86148.1
2-oxoglutarate dehydrogenase E1 component.
  
 
 0.475
SEL00219.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
  0.453
SEL47850.1
Hypothetical protein.
     
 0.449
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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