STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM43082.1TldD protein. (490 aa)    
Predicted Functional Partners:
SEM43056.1
Predicted Zn-dependent protease or its inactivated homolog.
 
     0.951
SEL97356.1
Predicted Zn-dependent protease or its inactivated homolog.
 
     0.790
SEM43105.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.773
SEM43131.1
Iron complex transport system substrate-binding protein.
       0.773
SEM43156.1
Iron complex transport system ATP-binding protein.
       0.618
SEM05951.1
Dihydrolipoamide dehydrogenase.
      
 0.485
SEK85339.1
Orotidine 5'-phosphate decarboxylase, subfamily 2.
      
 0.481
SEN19658.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
      
 0.481
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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