STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM63729.1CubicO group peptidase, beta-lactamase class C family. (412 aa)    
Predicted Functional Partners:
SEM63081.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.711
SEN77435.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.692
SEN58734.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.603
SEM99951.1
Beta-lactamase.
  
     0.563
SEM93270.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.529
SEL00687.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.511
SEM34700.1
Uncharacterized conserved protein YbbC, DUF1343 family.
 
    0.500
SEN23812.1
Cyclohexanone monooxygenase.
 
   
  0.440
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.416
SEM63749.1
DNA-binding ferritin-like protein (Dps family).
       0.410
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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