STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM66710.1NTF2-like N-terminal transpeptidase domain-containing protein. (510 aa)    
Predicted Functional Partners:
SEM55669.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 0.873
SEL25386.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
 
 0.850
SEL41242.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
 
 0.843
SEL25499.1
Cell division protein FtsQ; Essential cell division protein.
 
 
 0.830
SEN23503.1
Hypothetical protein.
  
 
 0.803
SEM55753.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.745
SEM55782.1
Rod shape-determining protein MreB.
 
 
 
 0.704
SEL26555.1
Membrane carboxypeptidase (penicillin-binding protein).
  
 
 0.676
SEL50346.1
Membrane carboxypeptidase (penicillin-binding protein).
  
 
 0.669
SEN07745.1
Membrane carboxypeptidase (penicillin-binding protein).
  
 
 0.661
Your Current Organism:
Nonomuraea pusilla
NCBI taxonomy Id: 46177
Other names: ATCC 27296, Actinomadura pusilla, BCRC 11619, CBS 262.72, CCRC 11619, CCRC:11619, CECT 3284, CIP 106954, DSM 43357, IFO 14684, IMET 9586, JCM 3144, KCTC 9278, Microtetraspora pusilla, N. pusilla, NBRC 14684, NCIMB 11116, NRRL B-16126, Nonomuria pusilla
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